OHNOLOGS

A Repository of Genes Retained from Whole Genome Duplications in the Vertebrate Genomes
Here you can download the pre-calculated files for the families and pairs for the three q-score criteria.


Ohnolog families and ohnolog pairs for medaka (Oryzias latipes) for 2R WGD

CriterionFamiliesPairs
Strict : q-score(outgroups) < 0.001 AND q-score(self comparison) < 0.001 Browse Download Browse Download
Intermediate : q-score(outgroups) < 0.01 AND q-score(self comparison) < 0.01 Browse Download Browse Download
Relaxed : q-score(outgroups) < 0.05 AND q-score(self comparison) < 0.3 Browse Download Browse Download

Ohnolog families and ohnolog pairs for medaka (Oryzias latipes) for 3R WGD

CriterionFamiliesPairs
Strict : q-score(outgroups) < 0.001 AND q-score(self comparison) < 0.001 Browse Download Browse Download
Intermediate : q-score(outgroups) < 0.01 AND q-score(self comparison) < 0.01 Browse Download Browse Download
Relaxed : q-score(outgroups) < 0.05 AND q-score(self comparison) < 0.3 Browse Download Browse Download